Pinned Loading

1. scbio-docker scbio-docker Public

   Docker environment for bulk and single-cell sequencing preprocessing and downstream analysis

   Shell

2. RNAseq-toolkit RNAseq-toolkit Public

   My R convenience scripts for general RNAseq: DE, GSEA, etc.

   R

3. TE-RNAseq-toolkit TE-RNAseq-toolkit Public

   My set of scripts, utilities to handle transposable elements workflows in RNAseq data

   R

4. pathway-explorer pathway-explorer Public

   Interactive exploration of bulkRNA-seq GSEA results

   Python

5. SciAgent-toolkit SciAgent-toolkit Public

   A convenience installation and configuration framework that integrates AI assistants (Claude Code, Gemini CLI, Codex CLI) and orchestrates specialised scientific research tools via MCP (Model Conte…

   Shell 1

6. notebook-tools-mcp notebook-tools-mcp Public

   Minimal read-only MCP server facilitating efficient and economic Jupyter notebook navigation with no Jupyter server, no kernel, no overhead

   Python